Back

Journal of Vision

Association for Research in Vision and Ophthalmology (ARVO)

Preprints posted in the last 7 days, ranked by how well they match Journal of Vision's content profile, based on 92 papers previously published here. The average preprint has a 0.03% match score for this journal, so anything above that is already an above-average fit.

1
Efficacy of Highly Aspherical Lenslet (HAL) spectacles in slowing myopia progression in children and adolescents: A multi-centre, retrospective, real-world study in India-SOLIDITY study

Saxena, R.; Jethani, J.; Roy, L.; Matalia, J.; Verkicharla, P. K.; Ganesh, S.; Parthasarathy, A.; Nayak, S.; Gupta, V.; Narendran, K.; Panmand, P.; Ghosh, P.; Muthu, S.; Srivastava, K.; Prenat, O.

2026-04-13 ophthalmology 10.64898/2026.04.10.26350578 medRxiv
Top 1%
0.2%
Show abstract

Objective: The study aims to evaluate the real-world effectiveness of Highly Aspherical Lenslets spectacle (HAL; Essilor(R) Stellest(R)) in slowing myopia progression among Indian children and adolescents aged between 4 and 16 years. Methods and analysis: This was a multicentre retrospective study conducted across 10 leading ophthalmic centers. The study participants comprised children aged between 4 and 16 years who were prescribed HAL spectacles (Essilor(R) Stellest(R)). Data were extracted from electronic medical records at three time points: T1: One year prior to intervention; T2: Baseline at HAL spectacle prescription; T3: 6 to 24 months after prescription. The primary endpoint was the myopia progression and axial elongation in the year following prescription, compared with the untreated year and with published meta-regression models. Only data from the right eye were analysed, with the expected physiological progression estimated based on the individual progression trajectory after adjusting for age-related slowing as reported in published meta-regression models. Results: A total of 372 myopic children were included in the study. The annual myopia progression was -0.72 {+/-} 0.47 D/year during the untreated period, reducing to -0.11 {+/-} 0.29 D/year with HAL spectacle wear. The expected progression without treatment was -0.65 D/year, based on trajectory-adjusted modelling, indicating a treatment effect of 0.54 D/years and an estimated 83% slowing in myopia progression compared to expected progression. The expected axial elongation under physiological conditions was 0.29 mm/year, estimated using age-adjusted meta-regression models; with HAL lens wear, axial elongation was 0.11 {+/-} 0.16 mm/year, corresponding to a [~]62% relative slowing of elongation. Conclusion: The present study demonstrates the real-world evidence validating the efficacy of HAL lenses as an effective myopia control intervention in Indian children and adolescents. The retrospective design and limited follow-up period warrant future prospective, long-term studies to validate these findings.

2
AENEAS Project: First real-time intraoperative application of machine vision-based anatomical guidance in neurosurgery

Sarwin, G.; Ricciuti, V.; Staartjes, V. E.; Carretta, A.; Daher, N.; Li, Z.; Regli, L.; Mazzatenta, D.; Zoli, M.; Seungjun, R.; Konukoglu, E.; Serra, C.

2026-04-11 surgery 10.64898/2026.04.09.26348607 medRxiv
Top 1%
0.2%
Show abstract

Background and Objectives: We report the first intraoperative deployment of a real-time machine vision system in neurosurgery, derived from our previous anatomical detection work, automatically identifying structures during endoscopic endonasal surgery. Existing systems demonstrate promising performance in offline anatomical recognition, yet so far none have been implemented during live operations. Methods: A real-time anatomy detection model was trained using the YOLOv8 architecture (Ultralytics). Following training completion in the PyTorch environment, the model was exported to ONNX format and further optimized using the NVIDIA TensorRT engine. Deployment was carried out using the NVIDIA Holoscan SDK, the system ran on an NVIDIA Clara AGX developer kit. We used the model for real-time recognition of intraoperative anatomical structures and compared it with the same video labelled manually as reference. Model performance was reported using the average precision at an intersection-over-union threshold of 0.5 (AP50). Furthermore, end-to-end delay from frame acquisition to the display of the annotated output was measured. Results: A mean AP50 of 0.56 was achieved. The model demonstrated reliable detection of the most relevant landmarks in the transsphenoidal corridor. The mean end-to-end latency of the model was 47.81 ms (median 46.57 ms). Conclusion: For the first time, we demonstrate that clinical-grade, real-time machine-vision assistance during neurosurgery is feasible and can provide continuous, automated anatomical guidance from the surgical field. This approach may enhance intraoperative orientation, reduce cognitive load, and offer a powerful tool for surgical training. These findings represent an initial step toward integrating real-time AI support into routine neurosurgical workflows.

3
Neural Sensitivity to Word Frequency Modulated by Morphological Structure: Univariate and Multivariate fMRI Evidence from Korean

Kim, J.; Lee, S.; Nam, K.

2026-04-16 neuroscience 10.1101/2025.11.20.689262 medRxiv
Top 1%
0.2%
Show abstract

A central question in psycholinguistics in visual word recognition is whether morphologically complex words are obligatorily decomposed into stems and affixes during visual word recognition or whether whole-word access can occur when forms are frequent and familiar. The present study investigated how morphological complexity and lexical frequency jointly shape neural responses by leveraging Korean nominal inflection, whose transparent stem-suffix structure permits a clean dissociation between base (stem) frequency and surface (whole-word) frequency. Twenty-five native Korean speakers completed a rapid event-related fMRI lexical decision task involving simple and inflected nouns that varied parametrically in both frequency measures. Representational similarity analysis (RSA) revealed robust encoding of surface frequency--but not base frequency--in the inferior frontal gyrus (IFG) pars opercularis and supramarginal gyrus (SMG), with significantly stronger correlations for inflected than simple nouns. Univariate analyses converged with this result: surface frequency selectively increased activation for inflected nouns in inferior parietal regions, whereas base frequency showed no reliable effects in any ROI. These findings challenge models positing obligatory pre-lexical decomposition, instead supporting accounts in which morphological processing is shaped by post-lexical, usage-driven lexical statistics. Taken together, our findings shed light on a distributed perspective on morphological processing, suggesting that structural and statistical factors jointly constrain access to morphologically complex forms.

4
Automated Detection of Dental Caries and Bone Loss on Periapical and Bitewing Radiographs using a YOLO Based Deep Learning Model

Alqaderi, H.; Kapadia, U.; Brahmbhatt, Y.; Papathanasiou, A.; Rodgers, D.; Arsenault, P.; Cardarelli, J.; Zavras, A.; Li, H.

2026-04-17 dentistry and oral medicine 10.64898/2026.04.12.26350726 medRxiv
Top 1%
0.1%
Show abstract

BackgroundDental caries and periodontal disease represent the most prevalent global oral health conditions, collectively affecting several billion people. The diagnostic interpretation of dental radiographs, a cornerstone of modern dentistry, is associated with considerable inter-observer variability. In routine clinical practice, clinicians are required to evaluate a high volume of radiographic images daily, a cognitively demanding task in which diagnostic fatigue, time constraints, and the inherent complexity of overlapping anatomical structures can lead to the inadvertent oversight of early-stage pathologies. Artificial intelligence (AI) offers a transformative opportunity to augment clinical decision-making by providing rapid, objective, and consistent radiographic analysis, thereby serving as a tireless adjunct capable of flagging findings that may be missed during routine human inspection. MethodsThis study developed and validated a deep learning system for the automated detection of dental caries and alveolar bone loss using a dataset of 1,063 periapical and bitewing radiographs. Two separate YOLOv8s object detection models were trained and evaluated using a rigorous 5-fold cross-validation methodology. To align with the clinical use-case of a screening tool where high sensitivity is paramount, a custom image-level evaluation criterion was employed: a true positive was recorded if any predicted bounding box had a Jaccard Index (IoU) > 0 with any ground truth annotation. Model performance was systematically evaluated at confidence thresholds of 0.10 and 0.05. ResultsAt a confidence threshold of 0.05, the caries detection model achieved a mean precision of 84.41% ({+/-}0.72%), recall of 85.97% ({+/-}4.72%), and an F1-score of 85.13% ({+/-}2.61%). The alveolar bone loss model demonstrated exceptionally high performance, with a mean precision of 95.47% ({+/-}0.94%), recall of 98.60% ({+/-}0.49%), and an F1-score of 97.00% ({+/-}0.46%). ConclusionThe YOLOv8-based models demonstrated high accuracy and high sensitivity for detecting dental caries and alveolar bone loss on periapical radiographs. The system shows significant potential as a reliable automated assistant for dental practitioners, helping to improve diagnostic consistency, reduce the risk of missed pathology, and ultimately enhance the standard of patient care.

5
Association of axial length and changes in aqueous depth with refractive outcomes in Chinese primary angle closure glaucoma patients

Wang, L.; Yang, Y.; Ng, T. K.; Chen, J.; Sun, X.

2026-04-14 ophthalmology 10.64898/2026.04.10.26350671 medRxiv
Top 2%
0.0%
Show abstract

Purpose: To identify the ocular biometric parameters associated with refractive outcomes in Chinese Primary angle closure glaucoma (PACG) patients receiving phacoemulsification and intraocular lens (IOL) implantation (PEI) surgery. Methods: 165 Chinese PACG patients receiving PEI and goniosynechialysis (GSL) and 53 cataract patients as controls only receiving PEI surgery were recruited. The prediction accuracy of IOL power calculation was assessed by the prediction error (PE), mean absolute error (MAE), median absolute error (MedAE), and proportions of eyes with a PE within {+/-} 0.25 diopters (D), {+/-} 0.50 D, {+/-} 0.75 D, and {+/-} 1.00 D. The association of different ocular biometric parameters with the PE of IOL calculation were evaluated. Results: The PACG patients had significantly higher absolute of PE as compared to the control subjects, especially the acute PACG patients. The axial length (AL), changes in aqueous depth pre- and post-surgery ({bigtriangleup}AD), and the ratio of {bigtriangleup}AD/AL were significantly associated with the PE in acute PACG patients. The association of {bigtriangleup}AD with the PE of IOL power calculation was found in PACG patients with AL [≥] 22 mm. Conclusions: This study revealed the association of AL and {bigtriangleup}AD with the PE of IOL calculation in Chinese PACG patients. Precisely predict the {bigtriangleup}AD is necessary for acute PACG patients, especially for those with AL [≥] 22 mm, to improve the refractive outcomes.

6
Ad-verse Effects: Pharmaceutical Advertising Shifts Drug Recommendations by Consumer-Facing AI

Omar, M.; Agbareia, R.; McGreevy, J.; Zebrowski, A.; Ramaswamy, A.; Gorin, M.; Anato, E. M.; Glicksberg, B. S.; Sakhuja, A.; Charney, A.; Klang, E.; Nadkarni, G.

2026-04-16 health policy 10.64898/2026.04.14.26350868 medRxiv
Top 3%
0.0%
Show abstract

Large language models are increasingly used for clinical guidance while their parent companies introduce advertising. We tested whether pharmaceutical ads embedded in the prompts of 12 models from OpenAI, Anthropic, and Google shift drug recommendations across 258,660 API calls and four experiments probing distinct epistemic conditions. When two drugs were both guideline appropriate, advertising shifted selection of the advertised drug by +12.7 percentage points (P < 0.001), with some model scenario pairs shifting from 0% to 100%. Google models were the most susceptible (+29.8 pp), followed by OpenAI (+10.9 pp), while Anthropic models showed minimal change (+2.0 pp). When the advertised product lacked evidence or was clinically suboptimal, models resisted. This reveals a structured vulnerability: advertising does not override medical knowledge but fills the space where clinical evidence is underdetermined. An open response sub analysis (2,340 calls across three representative models) confirmed that advertising restructures free-text clinical reasoning: models echoed ad claims at 2.7 times the baseline rate while maintaining high stated confidence and rarely disclosing the ad. Susceptibility was provider dependent (Google: +29.8 pp; OpenAI: +10.9 pp; Anthropic: +2.0 pp). Because this bias operates within clinically correct answers, it is invisible to accuracy based evaluation, identifying a class of AI safety vulnerability that standard testing cannot detect.

7
GPS Mobility Tracking, Ecological Momentary Assessment, and Qualitative Interviewing to Specify How Space Produces Intersectional Health Inequities: Development and Pilot Testing of the Spatial Intersectionality Health Framework (SIHF) and IGEMA Methodology

Cook, S. H.

2026-04-13 epidemiology 10.64898/2026.04.09.26350546 medRxiv
Top 3%
0.0%
Show abstract

Background. Young sexual and gender minorities of color face compound health risks shaped by interlocking systems of racism, cisgenderism, and class inequality. Spatial health research documents that place shapes health, but existing methods cannot specify the mechanisms through which spatial configurations produce different health outcomes for differently positioned people. This gap prevents targeted intervention. ObjectiveTo develop and pilot test the Spatial Intersectionality Health Framework (SIHF), which specifies three mechanisms through which space produces intersectional health inequities: Layered (multiple oppressive systems activating simultaneously), Positional (the same space producing different health pathways by intersectional position), and Conditional (nominally protective spaces carrying hidden costs for specific positions). We also introduce and validate Intersectional Geographically-Explicit Ecological Momentary Assessment (IGEMA) as the methodology operationalizing SIHF across three data levels. MethodsThe GeoSense study enrolled 32 young sexual and gender minorities of color (ages 18-29) in New York City. IGEMA was implemented across three integrated levels: (1) GPS mobility tracking via participants personal smartphones, linked to census tract structural exposure indices across n=19 participants; (2) ecological momentary assessment of intersectional discrimination with multilevel modeling of mood, stress, and sleep outcomes; and (3) map-guided qualitative interviews with SIHF mechanism coding and intercoder reliability assessment across 92 coded records from 18 participants. This study was conducted as the pilot for NIH R01HL169503. ResultsAll three SIHF mechanisms were empirically detectable. A compound structural gendered racism index outperformed every single-axis alternative in predicting daily mood (b=-0.048, p=.001) and stress (b=0.121, p<.001). The Positional mechanism accounted for 71% of coded harm experiences. Intercoder reliability for mechanism assignment reached kappa=0.824 at Stage 2 reconciliation. Daily intersectional discrimination predicted greater sleep disturbance (b=1.308, p=.004). ConclusionsSIHF and IGEMA together provide an empirically testable framework for specifying how space produces intersectional health inequities. Mechanism specification, not spatial location alone, is the condition for designing research and intervention that reaches the source of harm for multiply marginalized populations.

8
A multidomain intrinsic capacity score tracks longitudinal health trajectories in the UK Biobank

Zhai, T.; Babu, M.; Fuentealba, M.; Al Dajani, S.; Gladyshev, V. N.; Furman, D.; Snyder, M.

2026-04-13 epidemiology 10.64898/2026.04.10.26350621 medRxiv
Top 3%
0.0%
Show abstract

Quantitative measures for tracking functional health have generally been lacking. Intrinsic capacity (IC) has been proposed as an appropriate measure, but its metrics have been derived in small datasets and sparse longitudinal data. Using harmonized measures of cognition, locomotion, sensory function, vitality, and psychological well-being from 501,615 UK Biobank participants and followed for a median of 15.5 years, we derived domain-specific and composite IC scores. We examined associations with incident disease, cause-specific mortality, multimorbidity, lifestyle and socioeconomic factors, and multi-omic profiles from Olink proteomics, NMR metabolomics, clinical biochemistry, and blood-cell traits. We found that composite IC declined non-linearly with age, and within-person decline was steeper than the cross-sectional age measures. Participants with greater baseline morbidity, those who subsequently developed incident disease, and those who died earlier in follow-up showed lower IC trajectories across adulthood. The IC domains were only modestly correlated with one another, supporting multidimensionality, yet higher overall IC was associated with lower risk of most diseases examined. The dominant IC domain varied by endpoint, with cognition informative for dementia, sensory function for hearing loss, psychological capacity for depression, locomotion for osteoarthritis, and vitality for cardiometabolic outcomes. IC was also associated cross-sectionally with physical activity, insomnia, smoking, medication burden, and socioeconomic disadvantage. More proteins were found predictive for vitality, and enrichment converged on immune/inflammatory and metabolic pathways. Blood-based surrogates recapitulated part of the phenotypic signal, particularly for vitality. Overall, this IC framework captures longitudinal health trajectories and broad disease vulnerability in a large middle- to older-aged cohort and supports IC as a clinically meaningful, multidomain phenotype of aging and identifies blood-based correlates that may facilitate at-scale future monitoring of aging-related function declines.

9
Effect of a sanitation intervention on the nutritional status of children in Maputo, Mozambique: a controlled before-and-after trial

Knee, J.; Sumner, T.; Adriano, Z.; Opondo, C.; Holcomb, D.; Viegas, E.; Nala, R.; Brown, J.; Cumming, O.

2026-04-13 epidemiology 10.64898/2026.04.09.26350506 medRxiv
Top 3%
0.0%
Show abstract

BackgroundThe rapid growth of the worlds urban population has contributed to the expansion of informal urban settlements in many cities across the world. In these settings, lack of safe sanitation combined with high population density and poverty contributes to heightened health risks for often vulnerable populations. The aim of this study was to evaluate the effect of a shared, onsite sanitation intervention on the nutritional status of children in Maputo, Mozambique. MethodsThe Maputo Sanitation (MapSan) trial was a controlled before-and-after study to evaluate the effect of a shared, onsite sanitation intervention on child health in Maputo, Mozambique. Here, we report the effects on childhood stunting, wasting and underweight, and height-for-age, weight-for-height and weight-for-age z-scores. Children were enrolled aged 1-48 months at baseline and outcomes were measured before and 12 and 24 months after the intervention, with concurrent measurement among children in a comparable control arm. The primary analysis was intention-to-treat. The trial was registered at ClinicalTrials.gov, number NCT02362932. ResultsWe enrolled 757 and 852 children in the intervention and control groups respectively. There was no evidence for an effect of the intervention on any outcome at 12 or 24 months of follow-up except for wasting where there was very weak evidence for an effect (adjusted prevalence ratio: 0.497; 95% CI: 0.22-1.11; p=0.09). In two exploratory analyses - one including only those children born into compounds post-intervention and a second excluding children in control compounds which had independently improved their sanitation facilities during follow-up - we found that stunting increased in the intervention group whilst wasting decreased. ConclusionsThis study contributes to the growing evidence on the role of sanitation in shaping child health outcomes in informal urban settlements. We found no evidence for an effect on stunting and weak evidence for an effect on wasting. More research is needed to understand how sanitation can reduce childhood undernutrition in complex urban environments.

10
Feasibility of Endothelial Cell Isolation from Routine Coronary Function Testing in ANOCA Patients

de Jong, E. A. M.; Kapteijn, D.; Daniels, M.; Nijkamp, T.; Zalewski, P. D.; Beltrame, J. F.; Damman, P.; Civelek, M.; Benavente, E. D.; van de Hoef, T. P.; Den Ruijter, H. M.

2026-04-13 cardiovascular medicine 10.64898/2026.04.09.26350551 medRxiv
Top 3%
0.0%
Show abstract

Background | Angina with nonobstructive coronary arteries (ANOCA) is a heterogeneous condition encompassing distinct endotypes representing different underlying pathophysiological mechanisms. Endothelial dysfunction is considered a central hallmark of ANOCA. However, studying patient-derived endothelial cells (ECs) remains challenging due to the limited availability of disease-specific endothelial samples. We therefore aimed to assess the feasibility of isolating and culturing ECs from catheterization material obtained during routine coronary function testing in ANOCA patients. Methods | Catheterization material was collected from 79 ANOCA patients (84% female, age 58{+/-}10 years) undergoing coronary function testing. ECs were isolated, expanded and characterized using immunostaining, flow cytometry, gene expression profiling and functional assays. Results | EC isolation was successful in 43% of cases and resulted in 34 primary EC cultures that were expanded up to passage 10. Isolation success was independent of clinical or procedural characteristics. Isolated cells exhibited typical EC morphology and expressed EC markers confirmed by immunostaining, flow cytometry and gene expression analyses. EC marker gene expression remained largely stable over passages. However, stress- and defense-related gene expression programs increased over time, while proliferation-related processes decreased. Functional assays demonstrated that the coronary catheterization-derived ECs showed typical properties of wound healing, angiogenesis, activation responses upon stimuli and monocyte adhesion. Conclusions | This study demonstrates the feasibility of isolating and expanding ECs directly from catheterization material collected during routine coronary function testing in ANOCA patients. These patient-derived ECs retain characteristic endothelial features and functionality. This approach offers primary EC cultures to study the mechanisms underlying endothelial dysfunction in ANOCA.

11
WITHDRAWN: Detection of Measles Virus RNA in Wastewater: Monitoring for Wild-Type and Vaccine-Derived Strains in a National Preparedness Trial

Ahmed, W.; Gebrewold, M.; Verhagen, R.; Koh, M.; Gazeley, J.; Levy, A.; Simpson, S.; Nolan, M.

2026-04-13 epidemiology 10.64898/2026.04.09.26350527 medRxiv
Top 3%
0.0%
Show abstract

Wastewater surveillance (WWS) is established as a vital tool for monitoring polio and SARS-CoV-2 with potential to improve surveillance for many other infectious diseases. This study evaluated the feasibility of detecting measles virus (MeV) RNA in wastewater as part of a national WS preparedness trial in Brisbane, Australia, from March to June 2025. Composite and passive sampling methods were employed in parallel at three wastewater treatment plants serving populations between 230,000 and 584,000. Nucleic acids were extracted and analyzed using RT-qPCR targeting MeV N and M genes to distinguish wild-type and vaccine strains. MeV RNA were detected in both 24-hour composite and passive samples on May 26 to 27, 2025 from the largest catchment of 584,000 which also included an international airport. No measles cases were reported in this city or region within 4 weeks of the WS detections. These were confirmed as vaccine-derived measles virus (MeVV) strain via specific RT-qPCR assay. Extraction recoveries varied (11.5% to 70.5%), with passive sampling showing higher efficiency. This is the first report of use of passive samples for detection of MeV. These findings are consistent with other studies reporting WWS results of both MeVV genotype A and wild type genotype B and/or D. It demonstrates the potential for sensitive MeV WWS with rapid differentiation of MeVV from wild type MeV shedding, including in airport transport hubs and with different sample types. Use of WWS could strengthen measles surveillance by enabling rapid detection of MeV RNA and supporting outbreak preparedness and response. This requires optimised methods which are specific to or differentiate wild-type MeV from MeVV. Furthermore, the successful detection of MeV using passive sampling in this study highlights its potential for deployment in diverse global contexts which may include non-sewered settings.

12
Understanding community knowledge, attitudes and practices related to participation in household transmission investigations during infectious disease outbreaks

Meagher, N.; Hettiarachchi, D.; Hawkins, M. R.; Tavlian, S.; Spirkoska, V.; McVernon, J.; Carville, K. S.; Price, D. J.; Villanueva Cabezas, J. P.; Marcato, A. J.

2026-04-13 epidemiology 10.64898/2026.04.08.26350464 medRxiv
Top 3%
0.0%
Show abstract

BackgroundThe World Health Organization has developed several global template protocols for epidemiological investigations, including for household transmission investigations (HHTIs). These investigations facilitate rapid characterisation of novel or re-emerging respiratory pathogens and support evidence-based public health actions. Beyond technical readiness, community buy-in is central to the feasibility and acceptability of HHTIs. Research is needed to determine the perceived legitimacy among the community to inform local protocol adaptation and development of implementation plans that consider community attitudes and needs. MethodsIn 2025, we conducted a convenience survey of community members living in Victoria, Australia to explore: their understanding of emerging respiratory diseases; their willingness to take part in public health surveillance activities such as HHTIs; the acceptability of clinical and epidemiological data collection and respiratory/blood sample collection as main components of HHTIs, and; participant comfort towards including their companion animals in HHTIs. ResultsWe received 282 survey responses, of which 235 were included in the analysis dataset. Compared to the general Victorian population, our participants included a higher proportion of participants who reported being female, tertiary-educated, of Aboriginal and/or Torres Strait Islander heritage, born in Australia and speaking only English at home. Participants indicated overall high levels of comfort and acceptability towards participation in HHTIs, particularly in relation to clinical and epidemiological data collection, with lesser but still high levels of comfort with providing multiple respiratory specimens in a 14-day period. Participants were least comfortable with other specimens such as urine and blood. Involving companion animals in HHTIs was similarly acceptable as human-focused components. ConclusionsDespite our survey population being non-representative of the general Victorian population, our findings provide valuable descriptive insights into the acceptability of HHTIs in Victoria, Australia from which to benchmark future local and international surveys and community engagement activities.

13
SARS-CoV-2 Introductions into Lao PDR Revealed by Genomic Surveillance, 2021-2024

Panapruksachat, S.; Troupin, C.; Souksavanh, M.; Keeratipusana, C.; Vongsouvath, M.; Vongphachanh, S.; Vongsouvath, M.; Phommasone, K.; Somlor, S.; Robinson, M. T.; Chookajorn, T.; Kochakarn, T.; Day, N. P.; Mayxay, M.; Letizia, A. G.; Dubot-Peres, A.; Ashley, E. A.; Buchy, P.; Xangsayarath, P.; Batty, E. M.

2026-04-13 epidemiology 10.64898/2026.04.09.26349480 medRxiv
Top 3%
0.0%
Show abstract

We used 2492 whole genome sequences from Laos to investigate the molecular epidemiology of SARS-CoV-2 from 2021 through 2024, covering the major waves of COVID-19 disease in Laos including time periods of travel restrictions and after relaxation of travel across international borders. We identify successive waves of COVID-19 caused by shifts in the dominant lineage, beginning with the Alpha variant in April 2021 and continuing through the Delta and Omicron variants. We quantify a shift from a small number of viral introductions responsible for widespread transmission in early waves to a larger number of introductions for each variant after travel restrictions were lifted, and identify potential routes of introduction into the country. Our study underscores the importance of genomic surveillance to public health responses to characterize viral transmission dynamics during pandemics.

14
Frequency of bacterial STI testing amongst people accessing sexual health services in England, 2024: a cross-sectional analysis of national surveillance data

Baldry, G.; Harb, A.-K.; Findlater, L.; Ogaz, D.; Migchelsen, S. J.; Fifer, H.; Saunders, J.; Mohammed, H.; Sinka, K.

2026-04-13 epidemiology 10.64898/2026.04.08.26349546 medRxiv
Top 3%
0.0%
Show abstract

ObjectivesWe determined the frequency of sexually transmitted infection (STI) testing among people accessing sexual health services (SHS) in England. MethodsWe assessed STI testing frequency in face-to-face and online SHSs in England using data from the GUMCAD STI surveillance system. We quantified different combinations of tests (e.g. single chlamydia test or full STI screen), number of tests completed in 2024 and test positivity by sociodemographic and behavioural characteristics, as well as clinical setting and outcomes. ResultsOverall, there were 2,222,028 attendances at SHS in England in 2024 that involved tests for chlamydia, gonorrhoea, syphilis and/or HIV. Most of these attendances involved tests for all four of these STIs. Most people accessing SHS in England tested once (80.1%), and a small minority (1.9%) tested at least quarterly (4+ times). Some groups had a comparably larger proportion of quarterly testers; these included gay, bisexual, and other men who have sex with men (GBMSM) (6.7%), London residents (3.6%), online testers (2.5%), people using HIV-PrEP (13%), and people with 5+ partners in the previous 3 months (10.6%). Only 10.5% of GBMSM reporting higher-risk sexual behaviours tested quarterly despite recommendations for quarterly testing in this group. ConclusionsThe majority of those who tested for STIs in England in 2024 only tested once. The minority who tested at least quarterly had a higher proportion of GBMSM, people using HIV-PrEP, London residents and people reporting higher risk behaviours. Quarterly testing often appears to be aligned with current testing recommendations in England; however, we also observed that only a low proportion of behaviourally high-risk GBMSM and HIV-PrEP users are meeting these recommendations. It is important to acknowledge groups with lower or higher testing frequency when developing interventions and updating guidelines related to STI testing. WHAT IS ALREADY KNOWN ON THIS TOPICThe effectiveness of asymptomatic testing for chlamydia and gonorrhoea in gay, bisexual and other men who have sex with men (GBMSM), and the potential impact of the consequent increased antibiotic use on rising antimicrobial resistance and individual harm has recently been questioned. Testing and treatment remains a key pillar of STI prevention and management; despite this, there is limited evidence of STI testing frequency within sexual services (SHS) on a national level. WHAT THIS STUDY ADDSThis analysis shows that the majority of people attending SHSs in England in 2024 tested once, and only a small proportion of behaviourally high-risk people tested frequently. HOW THIS STUDY MIGHT AFFECT RESEARCH, PRACTICE OR POLICYAwareness of groups that are behaviourally high risk but testing infrequently is important to guide interventions and messaging regarding STI testing. The low levels of frequent testing, even among those who would be recommended quarterly testing under UK guidelines, provides important context for wider discussion around asymptomatic STI screening.

15
Wearable-derived physiological features for trans-diagnostic disease comparison and classification in the All of Us longitudinal real-world dataset

Huang, X.; Hsieh, C.; Nguyen, Q.; Renteria, M. E.; Gharahkhani, P.

2026-04-13 epidemiology 10.64898/2026.04.07.26350352 medRxiv
Top 3%
0.0%
Show abstract

Wearable-derived physiological features have been associated with disease risk, but most current studies focus on single conditions, limiting understanding of cross-disease patterns. This study adopts a trans-diagnostic approach to examine whether wearable data capture shared and condition-specific physiological signatures across multiple chronic conditions spanning physical and mental health, and then evaluates the utility of these features for disease classification. A total of 9,301 patients with at least 21 days of consecutive FitBit data from the All of Us Controlled Tier Dataset version 8 were analyzed. Disease subcohorts included cardiovascular disease (CVD), diabetes, obstructive sleep apnea (OSA), major depressive disorder (MDD), anxiety, bipolar disorder, and attention-deficit/ hyperactivity disorder (ADHD), chosen based on prevalence and relevance. Logistic regression and XGBoost models were fitted for each disease subcohort versus the control cohort. We found that compared to using just baseline demographic and lifestyle features, incorporating wearable-derived features enabled improved classification performance in all subcohorts for both models, except for ADHD where improvement was mainly observed for ROC-AUC in logistic regression model likely due to the smaller sample size in ADHD subcohort. The largest performance gains were observed in MDD (increase in ROC-AUC of 0.077 for Logistic regression, 0.071 for XGBoost; p < 0.001) and anxiety (increase in ROC-AUC of 0.077 for logistic regression, 0.108 for XGBoost; p < 0.001). This study provides one of the first comprehensive transdiagnostic evaluations of wearable-derived features for disease classification, highlighting their potential to enhance risk stratification in the real-world setting as a practical complement to clinical assessments and providing a foundation to explore more fine-grained wearable data. Author summaryWearable devices such as fitness trackers and smartwatches are becoming increasingly popular and affordable, providing continuous measurements of heart rate, physical activity, and sleep. Alongside the growing digitization of health records, this creates new opportunities for large-scale, real-world health studies. In this study, we analyzed wearable-derived physiological patterns across a range of chronic conditions spanning both physical and mental health to better understand how these signals relate to disease risk. We found that incorporating wearable-derived heart rate, activity and sleep features improved disease risk classification across several conditions, with particularly strong gains for major depressive disorder and anxiety. By examining how individual features contributed to model predictions, we also identified meaningful associations between physiological signals and disease risk. For example, both duration and day-to-day variation of deep and rapid eye movement (REM) sleep were associated with increased risk in certain conditions. Our study supports the development of real-time, automated tools to assess disease risk alongside clinical care.

16
Non-genetic component of height as a surrogate marker for childhood socioeconomic position and its association with cardiovascular and brain health: results from HCHS/SOL

Moon, J.-Y.; Filigrana, P.; Gallo, L. C.; Perreira, K. M.; Cai, J.; Daviglus, M.; Fernandez-Rhodes, L. E.; Garcia-Bedoya, O.; Qi, Q.; Thyagarajan, B.; Tarraf, W.; Wang, T.; Kaplan, R.; Isasi, C. R.

2026-04-13 epidemiology 10.64898/2026.04.08.26350438 medRxiv
Top 3%
0.0%
Show abstract

Childhood socioeconomic position (SEP) can have lifelong effects on health. Many studies have used adult height as a surrogate marker for early-life conditions. In this study, we derived the non-genetic component of height, calculated as the residual from sex-specific standardized height regressed on genetically predicted height, as a surrogate for childhood SEP, using data from the Hispanic Community Healthy Study/Study of Latinos (2008-2011). A positive residual would indicate favorable early-life conditions promoting growth, while a negative residual indicates early-life adversity that may stunt the development. The height residual was associated with early-life variables such as parental education, year of birth, US nativity and age at first migration to the US (50 states/DC), supporting the validity of height residual as a surrogate for early-life conditions. Furthermore, a height residual was positively associated with better cardiovascular health (CVH) and cognitive function among middle-aged and older adults. Interestingly, among <35 years old, the height residual was negatively associated with the "Lifes Essential 8" clinical CVH scores. These results suggest the non-genetic component of height as a surrogate for childhood environment, with predictive value for CVH and cognitive function.

17
Five-Domain Accelerometer-Derived Behavioral Exposome and Incident Cancer Risk in UK Biobank

Ni Chan Chin (Chengqin Ni), M.; Berrio, J. A.

2026-04-12 epidemiology 10.64898/2026.04.07.26350369 medRxiv
Top 3%
0.0%
Show abstract

BackgroundAccelerometer-derived behavioral phenotype captures multidimensional aspects of human behavior extending well beyond physical activity, encompassing light exposure, step counts, physical activity patterns, sleep, and circadian rhythms. Whether these five domains constitute a unified behavioral architecture underlying cancer risk and whether circadian organization and light exposure confer incremental predictive value beyond movement volume alone remains to be comprehensively established. MethodsWe conducted an accelerometer-wide association study (AWAS) encompassing the complete accelerometer-derived behavioral exposome across five behavioral domains in UK Biobank participants with valid wrist accelerometry data. Incident solid cancers were designated as the primary endpoint, with prespecified site-specific solid cancers and hematological malignancy as secondary outcomes. Cox proportional hazards models with age as the timescale were used. The minimal covariate set served as the primary reporting tier, followed by sensitivity analyses additionally adjusting for adiposity/metabolic factors, independent activity patterns, shift work history, and accelerometry measurement quality. Nominal statistical significance was defined as two-sided P < 0.05 ResultsAmong 89,080 participants, 6,598 incident solid cancer events were observed over a median follow-up of 8.39 years. In the minimally adjusted model, the pan-solid-tumor association atlas was dominated by signals from activity volume, inactivity fragmentation, and circadian rhythm. Higher overall acceleration (HR per SD: 0.91, 95% CI: 0.89-0.94) and higher daily step counts (HR: 0.93, 95% CI: 0.90-0.95) were independently associated with reduced solid cancer risk, while inactivity fragmentation metrics were consistently linked to higher risk. Notably, circadian rhythms, most prominently cosinor mesor (Midline Estimating Statistic of Rhythm under cosinor model), emerged as leading inverse risk signals, underscoring the independent contribution of circadian behavioral architecture. Site-specific analyses revealed pronounced heterogeneity across tumor sites. Lung cancer exhibited a robust inverse activity-risk gradient, while breast cancer showed reproducible associations with MVPA. Most strikingly, nocturnal light exposure demonstrated a tumor-site-specific association confined to pancreatic cancer, a signal absent across all other sites examined. Associations for uterine cancer were predominantly inactivity-related and substantially attenuated following adjustment for adiposity and metabolic factors. ConclusionsAcross five accelerometer-derived behavioral domains, solid cancers as a whole were most consistently associated with a high-movement, low-fragmentation, and circadian-coherent behavioral profile. While site-specific heterogeneity exists, the broad cancer risk landscape is dominated by movement volume, inactivity fragmentation, and circadian rhythmicity. Light exposure, although more localized in its contribution, demonstrates a potentially novel and specific association with pancreatic cancer risk. These findings support a five-domain behavioral exposome framework for cancer epidemiology and, importantly, position circadian rhythm integrity and nocturnal light exposure as critically understudied dimensions warranting dedicated mechanistic investigation.

18
Genetic Architecture and Myocardial Fibrotic Remodeling in Mitral Valve Prolapse

Small, A. M.; Yu, M.; Berrandou, T. E.; Georges, A.; Huff, M.; Morningstar, J. E.; Rand, S. A.; Koyama, S.; Lee, J.; Vy, H. M.; Farber-Eger, E.; Jin, S.; Dieterlen, M.-T.; Kontorovich, A. R.; Yang, T.-Y.; Do, R.; Dressen, M.; Krane, M.; Feirer, N.; Doppler, S. A.; Schunkert, H.; Trenkwalder, T.; Wells, Q. S.; Berger, K.; Ostrowski, S. R.; Sorensen, E.; Pedersen, O. B.; Bundgaard, J. S.; Ghouse, J.; Bundgaard, H.; Ganna, A.; Erikstrup, C.; Mikkelsen, C.; Bruun, M. T.; Aagaard, B.; Ullum, H.; Abner, E.; Slaugenhaupt, S. A.; Nadauld, L.; Knowlton, K.; Helgadottir, A.; Sveinbjornsson, G.; Gudbjart

2026-04-13 cardiovascular medicine 10.64898/2026.04.09.26350328 medRxiv
Top 3%
0.0%
Show abstract

Mitral valve prolapse (MVP) is the most common cause of primary mitral regurgitation and is associated with the development of malignant arrhythmias, often in the context of myocardial fibrosis. The genetic architecture of MVP, and whether there are genetic factors explaining why only some individuals with MVP have adverse outcomes, remains poorly understood. We performed a meta-analysis of genome-wide association studies (GWAS) for MVP encompassing 21,517 cases among a total sample size of over 2.2 million individuals. We discovered 89 genomic risk loci for MVP, of which 72 were novel findings. Prioritization of causal genes and pathways using epigenetic and transcriptomic data from mitral valve and extra-valvular tissues replicated known gene associations to MVP including those involved in TGF-{beta} signaling and extracellular matrix biology, but additionally emphasized a role in MVP for biological pathways relevant to cardiomyocyte biology. Accordingly, we identified several MVP risk loci with pleiotropy to cardiomyopathies, especially hypertrophic cardiomyopathy, and demonstrated a significant genetic correlation between MVP and hypertrophic cardiomyopathy. Finally, we interrogated snRNA-seq data in human papillary muscle tissue from two individuals with severe MVP, characterizing genes associated with both risk of papillary muscle fibrosis and MVP.

19
Dengue risk perception and public preferences for vector control in Italy and France: utility and regret-based choice experiments

Andrei, F.; Tizzoni, M.; Veltri, G. A.

2026-04-11 epidemiology 10.64898/2026.04.10.26350604 medRxiv
Top 3%
0.0%
Show abstract

Background: Dengue is rapidly emerging in parts of Europe. How households value vector control attributes, and whether inferences depend on decision models or message framing, is unclear. Methods: We conducted a split-ballot online experiment among adults in Italy and France, as well as a hotspot subsample from Marche, Italy. National samples included 1,505 respondents in Italy and 1,501 in France; 183 respondents were recruited in Marche. Participants were randomised to a discrete choice experiment (random utility maximisation) or a regret-based choice experiment (random regret minimisation) and to one of three pre-task messages (control, loss aversion, community values). Each respondent completed 12 choice tasks comparing two dengue control programmes and an opt-out. We estimated mixed logit and mixed random-regret models with random parameters and treatment effects. Results: Across frameworks, nearby cases and high mosquito prevalence were the dominant drivers of programme uptake, whereas cost and operational burden were secondary. In pooled analyses, loss-aversion messaging increased the weight on high mosquito prevalence in both models (from 0.483 to 0.547 in the utility model; from 0.478 to 0.557 in the regret model). Cost effects were small nationally but larger in the hotspot subsample. Conclusions: Risk salience dominates preferences for dengue vector control in these European settings. Random utility and random regret models yield consistent rankings of attributes but differ in behavioural interpretation and some secondary effects; messaging effects were modest and context dependent.

20
Prevalence and Factors Associated with Family-Based HIV Index Case Testing in Wolaita Zone, Southern Ethiopia, 2023: A Cross-Sectional Study

Koyra, A. B.; Mohammed, F.; Eshete, T.

2026-04-11 epidemiology 10.64898/2026.04.08.26350444 medRxiv
Top 3%
0.0%
Show abstract

BackgroundFamily-based HIV index case testing identifies family members with unknown HIV status and links them to care. Data are limited in southern Ethiopia. MethodsA facility-based cross-sectional study was conducted among 377 adults on antiretroviral therapy (ART) in Wolaita Zone, Southern Ethiopia, from November 2022 to May 2023. Participants were selected using systematic random sampling. Data were collected via interviewer-administered semi-structured questionnaire. Multivariable logistic regression identified factors associated with index case family testing. Adjusted odds ratios (AOR) with 95% confidence intervals (CI) were calculated, and statistical significance was declared at p < 0.05. ResultsThe proportion of index case family testing for HIV was 84.9% (95% CI: 81.2- 88.6). In multivariable analysis, urban residence (AOR = 2.8; 95% CI: 1.16-6.75), duration on ART greater than 12 months (AOR = 13.0; 95% CI: 4.6-36.9), disclosure of HIV status to family members (AOR = 5.6; 95% CI: 1.9-16.5), discussion of HIV status with family members (AOR = 6.6; 95% CI: 1.9-23.2), and being counselled by health professionals to bring families for testing (AOR = 6.3; 95% CI: 2.1-19.0) were significantly associated with index case family testing. ConclusionThe prevalence of family-based HIV index case testing in Wolaita Zone was 84.9%, below the national 95% target. Health professionals should strengthen counselling on ART adherence, status disclosure, family discussion, and active referral to improve testing uptake among family members of people living with HIV.